Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
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External references
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ID History
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Gene: LINC01894 ENSG00000264345

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Description

long intergenic non-protein coding RNA 1894 [Source:HGNC Symbol;Acc:HGNC:52713]

Location

Chromosome 18: 24,932,060-25,016,751 reverse strand.

GRCh38:CM000680.2

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000781982.1	LINC01894-206	1146	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000670277.2	LINC01894-204	2243	No protein	-	lncRNA		-	-
ENST00000781983.1	LINC01894-207	1661	No protein	-	lncRNA		-	-
ENST00000781987.1	LINC01894-211	1374	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781985.1	LINC01894-209	1341	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781986.1	LINC01894-210	1325	No protein	-	lncRNA		-	-
ENST00000665916.1	LINC01894-203	1286	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670369.2	LINC01894-205	1278	No protein	-	lncRNA		-	-
ENST00000781984.1	LINC01894-208	1266	No protein	-	lncRNA		-	-
ENST00000781989.1	LINC01894-213	609	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781988.1	LINC01894-212	488	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580984.1	LINC01894-201	487	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000582697.1	LINC01894-202	386	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Summary

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