Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PWRN4 ENSG00000260232

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Description

Prader-Willi region non-protein coding RNA 4 [Source:HGNC Symbol;Acc:HGNC:49130]

Gene Synonyms

LINC01084

Location

Chromosome 15: 23,912,409-24,090,821 forward strand.

GRCh38:CM000677.2

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000652183.1	PWRN4-202	1843	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000663429.1	PWRN4-205	2101	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661343.1	PWRN4-204	1544	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724249.1	PWRN4-211	1482	No protein	-	lncRNA		-	-
ENST00000724253.1	PWRN4-215	1414	No protein	-	lncRNA		-	-
ENST00000663707.1	PWRN4-206	1392	No protein	-	lncRNA		-	-
ENST00000724248.1	PWRN4-210	1143	No protein	-	lncRNA		-	-
ENST00000724254.1	PWRN4-216	971	No protein	-	lncRNA		-	-
ENST00000724246.1	PWRN4-208	832	No protein	-	lncRNA		-	-
ENST00000724252.1	PWRN4-214	772	No protein	-	lncRNA		-	-
ENST00000724251.1	PWRN4-213	750	No protein	-	lncRNA		-	-
ENST00000724250.1	PWRN4-212	671	No protein	-	lncRNA		-	-
ENST00000657402.1	PWRN4-203	638	No protein	-	lncRNA		-	-
ENST00000724247.1	PWRN4-209	458	No protein	-	lncRNA		-	-
ENST00000688986.2	PWRN4-207	449	No protein	-	lncRNA		-	-
ENST00000563016.1	PWRN4-201	420	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Summary

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