Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PPP1R13B-DT ENSG00000258735

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Description

PPP1R13B divergent transcript [Source:HGNC Symbol;Acc:HGNC:27069]

Gene Synonyms

HITT, LINC00637

Location

Chromosome 14: 103,847,687-103,880,381 forward strand.

GRCh38:CM000676.2

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000780813.1	PPP1R13B-DT-208	1031	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000556586.1	PPP1R13B-DT-201	2056	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000780822.1	PPP1R13B-DT-217	1714	No protein	-	lncRNA		-	-
ENST00000780823.1	PPP1R13B-DT-218	1673	No protein	-	lncRNA		-	-
ENST00000667526.1	PPP1R13B-DT-206	1473	No protein	-	lncRNA		-	-
ENST00000780820.1	PPP1R13B-DT-215	1429	No protein	-	lncRNA		-	-
ENST00000780818.1	PPP1R13B-DT-213	1410	No protein	-	lncRNA		-	-
ENST00000654695.1	PPP1R13B-DT-203	1385	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658303.1	PPP1R13B-DT-204	1338	No protein	-	lncRNA		-	-
ENST00000780817.1	PPP1R13B-DT-212	1318	No protein	-	lncRNA		-	-
ENST00000716871.1	PPP1R13B-DT-207	1314	No protein	-	lncRNA		-	-
ENST00000660176.1	PPP1R13B-DT-205	1292	No protein	-	lncRNA		-	-
ENST00000780814.1	PPP1R13B-DT-209	1230	No protein	-	lncRNA		-	-
ENST00000780821.1	PPP1R13B-DT-216	1215	No protein	-	lncRNA		-	-
ENST00000780816.1	PPP1R13B-DT-211	1187	No protein	-	lncRNA		-	-
ENST00000780815.1	PPP1R13B-DT-210	1127	No protein	-	lncRNA		-	-
ENST00000780819.1	PPP1R13B-DT-214	1069	No protein	-	lncRNA		-	-
ENST00000780824.1	PPP1R13B-DT-219	1032	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000556653.1	PPP1R13B-DT-202	127	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Summary

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