Gene: LINC01397 ENSG00000258673

Description

long intergenic non-protein coding RNA 1397 [Source:HGNC Symbol;Acc:HGNC:50677]

Location

Chromosome 1: 110,082,638-110,138,881 forward strand.

GRCh38:CM000663.2

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000751945.1	LINC01397-205	735	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751960.1	LINC01397-220	3174	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751961.1	LINC01397-221	1663	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751954.1	LINC01397-214	1460	No protein	-	lncRNA	-	-
ENST00000751955.1	LINC01397-215	890	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751956.1	LINC01397-216	862	No protein	-	lncRNA	-	-
ENST00000751958.1	LINC01397-218	817	No protein	-	lncRNA	-	-
ENST00000751957.1	LINC01397-217	803	No protein	-	lncRNA	-	-
ENST00000751963.1	LINC01397-223	728	No protein	-	lncRNA	-	-
ENST00000751959.1	LINC01397-219	656	No protein	-	lncRNA	-	-
ENST00000701866.2	LINC01397-202	613	No protein	-	lncRNA	-	-
ENST00000702814.2	LINC01397-204	599	No protein	-	lncRNA	-	-
ENST00000751947.1	LINC01397-207	589	No protein	-	lncRNA	-	-
ENST00000751965.1	LINC01397-225	589	No protein	-	lncRNA	-	-
ENST00000751951.1	LINC01397-211	580	No protein	-	lncRNA	-	-
ENST00000554808.1	LINC01397-201	579	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000751950.1	LINC01397-210	577	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702583.2	LINC01397-203	576	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000751948.1	LINC01397-208	546	No protein	-	lncRNA	-	-
ENST00000751952.1	LINC01397-212	535	No protein	-	lncRNA	-	-
ENST00000751949.1	LINC01397-209	503	No protein	-	lncRNA	-	-
ENST00000751946.1	LINC01397-206	492	No protein	-	lncRNA	-	-
ENST00000751964.1	LINC01397-224	490	No protein	-	lncRNA	-	-
ENST00000751962.1	LINC01397-222	455	No protein	-	lncRNA	-	-
ENST00000751966.1	LINC01397-226	389	No protein	-	lncRNA	-	-
ENST00000751953.1	LINC01397-213	353	No protein	-	lncRNA	-	-

Gene: LINC01397 ENSG00000258673

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Gene: LINC01397 ENSG00000258673

Summary

About Us

Get help

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