Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
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Gene: LINC02700 ENSG00000255666

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Description

long intergenic non-protein coding RNA 2700 [Source:HGNC Symbol;Acc:HGNC:54214]

Location

Chromosome 11: 94,638,018-94,652,884 forward strand.

GRCh38:CM000673.2

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000648581.1	LINC02700-205	2753	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000768270.1	LINC02700-210	1105	No protein	-	lncRNA		-	-
ENST00000540151.6	LINC02700-201	1060	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000768269.1	LINC02700-209	1027	No protein	-	lncRNA		-	-
ENST00000768268.1	LINC02700-208	888	No protein	-	lncRNA		-	-
ENST00000768272.1	LINC02700-212	887	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716168.1	LINC02700-206	712	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544019.5	LINC02700-204	644	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000541293.1	LINC02700-202	574	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000542479.1	LINC02700-203	532	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000768271.1	LINC02700-211	473	No protein	-	lncRNA		-	-
ENST00000716169.1	LINC02700-207	455	No protein	-	lncRNA		-	-
ENST00000768275.1	LINC02700-215	416	No protein	-	lncRNA		-	-
ENST00000768273.1	LINC02700-213	352	No protein	-	lncRNA		-	-
ENST00000768274.1	LINC02700-214	341	No protein	-	lncRNA		-	-
ENST00000768276.1	LINC02700-216	119	No protein	-	lncRNA		-	-

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Summary

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