Gene: LINC01016 ENSG00000249346

Description

long intergenic non-protein coding RNA 1016 [Source:HGNC Symbol;Acc:HGNC:48991]

Location

Chromosome 6: 33,834,487-33,983,208 reverse strand.

GRCh38:CM000668.2

About this gene

This gene has 34 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000799599.1	LINC01016-213	1078	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000671143.1	LINC01016-212	4012	No protein	-	lncRNA	-	-
ENST00000506222.7	LINC01016-201	3277	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000799602.1	LINC01016-216	1803	No protein	-	lncRNA	-	-
ENST00000659818.2	LINC01016-209	1763	No protein	-	lncRNA	-	-
ENST00000799614.1	LINC01016-228	1758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799609.1	LINC01016-223	1751	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799617.1	LINC01016-231	1718	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799618.1	LINC01016-232	1557	No protein	-	lncRNA	-	-
ENST00000799603.1	LINC01016-217	1463	No protein	-	lncRNA	-	-
ENST00000525746.2	LINC01016-202	1456	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000533304.4	LINC01016-205	1274	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000655885.2	LINC01016-206	1167	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000531046.2	LINC01016-204	1138	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000799601.1	LINC01016-215	1128	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799607.1	LINC01016-221	1116	No protein	-	lncRNA	-	-
ENST00000799608.1	LINC01016-222	1111	No protein	-	lncRNA	-	-
ENST00000799600.1	LINC01016-214	1061	No protein	-	lncRNA	-	-
ENST00000525912.2	LINC01016-203	1020	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000799604.1	LINC01016-218	976	No protein	-	lncRNA	-	-
ENST00000799619.1	LINC01016-233	887	No protein	-	lncRNA	-	-
ENST00000799610.1	LINC01016-224	861	No protein	-	lncRNA	-	-
ENST00000666060.1	LINC01016-211	798	No protein	-	lncRNA	-	-
ENST00000656180.2	LINC01016-207	750	No protein	-	lncRNA	-	-
ENST00000799611.1	LINC01016-225	684	No protein	-	lncRNA	-	-
ENST00000799613.1	LINC01016-227	683	No protein	-	lncRNA	-	-
ENST00000656906.2	LINC01016-208	670	No protein	-	lncRNA	-	-
ENST00000799606.1	LINC01016-220	632	No protein	-	lncRNA	-	-
ENST00000661137.2	LINC01016-210	630	No protein	-	lncRNA	-	-
ENST00000799612.1	LINC01016-226	602	No protein	-	lncRNA	-	-
ENST00000799605.1	LINC01016-219	562	No protein	-	lncRNA	-	-
ENST00000799616.1	LINC01016-230	518	No protein	-	lncRNA	-	-
ENST00000799620.1	LINC01016-234	403	No protein	-	lncRNA	-	-
ENST00000799615.1	LINC01016-229	402	No protein	-	lncRNA	-	-

Gene: LINC01016 ENSG00000249346

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Gene: LINC01016 ENSG00000249346

Summary

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