Gene: LINC00939 ENSG00000249267

Description

long intergenic non-protein coding RNA 939 [Source:HGNC Symbol;Acc:HGNC:48631]

Location

Chromosome 12: 125,943,740-125,983,667 reverse strand.

GRCh38:CM000674.2

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000822064.1	LINC00939-207	991	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000502479.1	LINC00939-201	4972	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000507313.6	LINC00939-202	2877	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000545784.7	LINC00939-203	2097	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000702017.2	LINC00939-206	1858	No protein	-	lncRNA	-	-
ENST00000822077.1	LINC00939-220	1732	No protein	-	lncRNA	-	-
ENST00000822074.1	LINC00939-217	1421	No protein	-	lncRNA	-	-
ENST00000822071.1	LINC00939-214	1383	No protein	-	lncRNA	-	-
ENST00000822076.1	LINC00939-219	1342	No protein	-	lncRNA	-	-
ENST00000653452.2	LINC00939-204	1335	No protein	-	lncRNA	-	-
ENST00000668374.1	LINC00939-205	1239	No protein	-	lncRNA	-	-
ENST00000822073.1	LINC00939-216	1171	No protein	-	lncRNA	-	-
ENST00000822067.1	LINC00939-210	1159	No protein	-	lncRNA	-	-
ENST00000822081.1	LINC00939-224	1140	No protein	-	lncRNA	-	-
ENST00000822069.1	LINC00939-212	1041	No protein	-	lncRNA	-	-
ENST00000822075.1	LINC00939-218	1033	No protein	-	lncRNA	-	-
ENST00000822066.1	LINC00939-209	991	No protein	-	lncRNA	-	-
ENST00000822070.1	LINC00939-213	942	No protein	-	lncRNA	-	-
ENST00000822072.1	LINC00939-215	887	No protein	-	lncRNA	-	-
ENST00000822083.1	LINC00939-226	885	No protein	-	lncRNA	-	-
ENST00000822079.1	LINC00939-222	854	No protein	-	lncRNA	-	-
ENST00000822068.1	LINC00939-211	819	No protein	-	lncRNA	-	-
ENST00000822078.1	LINC00939-221	817	No protein	-	lncRNA	-	-
ENST00000822065.1	LINC00939-208	707	No protein	-	lncRNA	-	-
ENST00000822082.1	LINC00939-225	421	No protein	-	lncRNA	-	-
ENST00000822080.1	LINC00939-223	409	No protein	-	lncRNA	-	-

Gene: LINC00939 ENSG00000249267

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Gene: LINC00939 ENSG00000249267

Summary

About Us

Get help

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