Gene: LINC01948 ENSG00000248727

Description

long intergenic non-protein coding RNA 1948 [Source:HGNC Symbol;Acc:HGNC:52772]

Location

Chromosome 5: 56,449,986-56,482,121 reverse strand.

GRCh38:CM000667.2

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000724081.1	LINC01948-205	660	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000665339.2	LINC01948-204	6798	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511661.3	LINC01948-202	3505	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000653172.1	LINC01948-203	3348	No protein	-	lncRNA	-	-
ENST00000724085.1	LINC01948-209	1755	No protein	-	lncRNA	-	-
ENST00000724101.1	LINC01948-225	1577	No protein	-	lncRNA	-	-
ENST00000724086.1	LINC01948-210	1519	No protein	-	lncRNA	-	-
ENST00000506836.6	LINC01948-201	1387	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000724082.1	LINC01948-206	1241	No protein	-	lncRNA	-	-
ENST00000724087.1	LINC01948-211	1213	No protein	-	lncRNA	-	-
ENST00000724089.1	LINC01948-213	1185	No protein	-	lncRNA	-	-
ENST00000724096.1	LINC01948-220	1176	No protein	-	lncRNA	-	-
ENST00000724100.1	LINC01948-224	1174	No protein	-	lncRNA	-	-
ENST00000724088.1	LINC01948-212	1144	No protein	-	lncRNA	-	-
ENST00000724091.1	LINC01948-215	1143	No protein	-	lncRNA	-	-
ENST00000724093.1	LINC01948-217	1059	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724090.1	LINC01948-214	921	No protein	-	lncRNA	-	-
ENST00000724097.1	LINC01948-221	892	No protein	-	lncRNA	-	-
ENST00000724102.1	LINC01948-226	846	No protein	-	lncRNA	-	-
ENST00000724092.1	LINC01948-216	808	No protein	-	lncRNA	-	-
ENST00000724099.1	LINC01948-223	771	No protein	-	lncRNA	-	-
ENST00000724084.1	LINC01948-208	699	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724083.1	LINC01948-207	650	No protein	-	lncRNA	-	-
ENST00000724095.1	LINC01948-219	639	No protein	-	lncRNA	-	-
ENST00000724098.1	LINC01948-222	601	No protein	-	lncRNA	-	-
ENST00000724094.1	LINC01948-218	559	No protein	-	lncRNA	-	-

Gene: LINC01948 ENSG00000248727

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Gene: LINC01948 ENSG00000248727

Summary

About Us

Get help

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