Gene: SNHG6 ENSG00000245910

Description

small nucleolar RNA host gene 6 [Source:HGNC Symbol;Acc:HGNC:32965]

Gene Synonyms

HBII-276HG, NCRNA00058, U87HG

Location

Chromosome 8: 66,895,990-66,926,525 reverse strand.

GRCh38:CM000670.2

About this gene

This gene has 30 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000521127.2	SNHG6-204	959	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000820839.1	SNHG6-209	406	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000520944.7	SNHG6-203	2551	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000686474.3	SNHG6-206	2358	No protein	-	lncRNA	-	-
ENST00000820844.1	SNHG6-214	1022	No protein	-	lncRNA	-	-
ENST00000820846.1	SNHG6-216	913	No protein	-	lncRNA	-	-
ENST00000520619.2	SNHG6-202	697	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000820853.1	SNHG6-223	695	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689720.2	SNHG6-207	677	No protein	-	lncRNA	-	-
ENST00000820841.1	SNHG6-211	610	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820848.1	SNHG6-218	529	No protein	-	lncRNA	-	-
ENST00000820840.1	SNHG6-210	517	No protein	-	lncRNA	-	-
ENST00000820852.1	SNHG6-222	496	No protein	-	lncRNA	-	-
ENST00000820845.1	SNHG6-215	491	No protein	-	lncRNA	-	-
ENST00000820843.1	SNHG6-213	490	No protein	-	lncRNA	-	-
ENST00000520348.7	SNHG6-201	475	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000820850.1	SNHG6-220	468	No protein	-	lncRNA	-	-
ENST00000820856.1	SNHG6-226	467	No protein	-	lncRNA	-	-
ENST00000820859.1	SNHG6-229	462	No protein	-	lncRNA	-	-
ENST00000820855.1	SNHG6-225	452	No protein	-	lncRNA	-	-
ENST00000521399.8	SNHG6-205	441	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000820847.1	SNHG6-217	413	No protein	-	lncRNA	-	-
ENST00000820857.1	SNHG6-227	397	No protein	-	lncRNA	-	-
ENST00000820854.1	SNHG6-224	394	No protein	-	lncRNA	-	-
ENST00000820849.1	SNHG6-219	367	No protein	-	lncRNA	-	-
ENST00000820851.1	SNHG6-221	355	No protein	-	lncRNA	-	-
ENST00000820858.1	SNHG6-228	342	No protein	-	lncRNA	-	-
ENST00000693345.2	SNHG6-208	332	No protein	-	lncRNA	-	-
ENST00000820842.1	SNHG6-212	321	No protein	-	lncRNA	-	-
ENST00000820860.1	SNHG6-230	320	No protein	-	lncRNA	-	-

Gene: SNHG6 ENSG00000245910

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: SNHG6 ENSG00000245910

Summary

About Us

Get help

Our sister sites

Follow us