Gene: CXXC4-AS1 ENSG00000245384

Description

CXXC4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41054]

Location

Chromosome 4: 104,490,803-104,734,546 forward strand.

GRCh38:CM000666.2

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000723209.1	CXXC4-AS1-205	1716	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664466.1	CXXC4-AS1-204	4904	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000500179.1	CXXC4-AS1-201	2968	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000655215.1	CXXC4-AS1-203	2881	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723216.1	CXXC4-AS1-212	1702	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723210.1	CXXC4-AS1-206	1679	No protein	-	lncRNA	-	-
ENST00000723219.1	CXXC4-AS1-215	1634	No protein	-	lncRNA	-	-
ENST00000723217.1	CXXC4-AS1-213	1526	No protein	-	lncRNA	-	-
ENST00000723211.1	CXXC4-AS1-207	1469	No protein	-	lncRNA	-	-
ENST00000723212.1	CXXC4-AS1-208	1153	No protein	-	lncRNA	-	-
ENST00000723213.1	CXXC4-AS1-209	841	No protein	-	lncRNA	-	-
ENST00000723506.1	CXXC4-AS1-216	818	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723214.1	CXXC4-AS1-210	802	No protein	-	lncRNA	-	-
ENST00000723218.1	CXXC4-AS1-214	736	No protein	-	lncRNA	-	-
ENST00000508358.2	CXXC4-AS1-202	694	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000723512.1	CXXC4-AS1-222	629	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723516.1	CXXC4-AS1-226	619	No protein	-	lncRNA	-	-
ENST00000723508.1	CXXC4-AS1-218	588	No protein	-	lncRNA	-	-
ENST00000723514.1	CXXC4-AS1-224	579	No protein	-	lncRNA	-	-
ENST00000723510.1	CXXC4-AS1-220	562	No protein	-	lncRNA	-	-
ENST00000723511.1	CXXC4-AS1-221	551	No protein	-	lncRNA	-	-
ENST00000723515.1	CXXC4-AS1-225	510	No protein	-	lncRNA	-	-
ENST00000723215.1	CXXC4-AS1-211	470	No protein	-	lncRNA	-	-
ENST00000723509.1	CXXC4-AS1-219	464	No protein	-	lncRNA	-	-
ENST00000723513.1	CXXC4-AS1-223	447	No protein	-	lncRNA	-	-
ENST00000723507.1	CXXC4-AS1-217	381	No protein	-	lncRNA	-	-

Gene: CXXC4-AS1 ENSG00000245384

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Gene: CXXC4-AS1 ENSG00000245384

Summary

About Us

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