Human (GRCh38.p14)
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZP761J1324, NCRNA00043, SOX2OT

Location

Chromosome 3: 180,989,510-181,836,880 forward strand.

GRCh38:CM000665.2

About this gene

This gene has 214 transcripts (splice variants).

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
-Ensembl CanonicalGENCODE PrimaryGENCODE BasicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
-GENCODE Basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
--
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
--
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
--
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
--
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
--
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
-TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
--
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
--
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
-TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
--
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
--
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
-GENCODE Basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
--
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
--
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
-GENCODE Basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
-GENCODE BasicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
-GENCODE Basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
-GENCODE BasicTSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
-GENCODE Basic
ENST00000645960.2SOX2-OT-2762379No protein-
 
lncRNA
-GENCODE Basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
-GENCODE Basic
ENST00000642685.2SOX2-OT-2632280No protein-
 
lncRNA
-GENCODE Basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
-GENCODE Basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
-TSL:2
ENST00000736125.1SOX2-OT-4092127No protein-
 
lncRNA
-GENCODE Basic
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
--
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
--
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
-GENCODE Basic
ENST00000725557.1SOX2-OT-3212027No protein-
 
lncRNA
--
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
-GENCODE Basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
-GENCODE Basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
-GENCODE Basic
ENST00000736126.1SOX2-OT-4101826No protein-
 
lncRNA
--
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
-TSL:1
ENST00000668295.4SOX2-OT-3011771No protein-
 
lncRNA
-GENCODE Basic
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
-GENCODE Basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000725561.1SOX2-OT-3251631No protein-
 
lncRNA
--
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
--
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
--
ENST00000485035.4SOX2-OT-2091581No protein-
 
lncRNA
-TSL:4
ENST00000725556.1SOX2-OT-3201566No protein-
 
lncRNA
--
ENST00000690586.2SOX2-OT-3131557No protein-
 
lncRNA
--
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--
ENST00000460739.6SOX2-OT-2011479No protein-
 
lncRNA
-TSL:4
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--
ENST00000725590.1SOX2-OT-3541415No protein-
 
lncRNA
--
ENST00000736093.1SOX2-OT-3771414No protein-
 
lncRNA
--
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
-TSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--
ENST00000736092.1SOX2-OT-3761384No protein-
 
lncRNA
--
ENST00000630482.3SOX2-OT-2551378No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000626802.3SOX2-OT-2391336No protein-
 
lncRNA
-TSL:5
ENST00000461063.7SOX2-OT-2021290No protein-
 
lncRNA
-TSL:3
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
--
ENST00000736095.1SOX2-OT-3791272No protein-
 
lncRNA
--
ENST00000691318.2SOX2-OT-3141255No protein-
 
lncRNA
--
ENST00000736091.1SOX2-OT-3751251No protein-
 
lncRNA
--
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
--
ENST00000647552.2SOX2-OT-2891241No protein-
 
lncRNA
--
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
-TSL:3
ENST00000725564.1SOX2-OT-3281239No protein-
 
lncRNA
-GENCODE Basic
ENST00000725562.1SOX2-OT-3261211No protein-
 
lncRNA
-GENCODE Basic
ENST00000725573.1SOX2-OT-3371169No protein-
 
lncRNA
--
ENST00000725574.1SOX2-OT-3381168No protein-
 
lncRNA
--
ENST00000725567.1SOX2-OT-3311167No protein-
 
lncRNA
--
ENST00000736090.1SOX2-OT-3741153No protein-
 
lncRNA
--
ENST00000725589.1SOX2-OT-3531133No protein-
 
lncRNA
--
ENST00000736094.1SOX2-OT-3781133No protein-
 
lncRNA
--
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
--
ENST00000736096.1SOX2-OT-3801109No protein-
 
lncRNA
--
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
--
ENST00000725572.1SOX2-OT-3361073No protein-
 
lncRNA
--
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
--
ENST00000693669.2SOX2-OT-3151057No protein-
 
lncRNA
--
ENST00000725576.1SOX2-OT-3401048No protein-
 
lncRNA
--
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
-TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
-TSL:5
ENST00000736127.1SOX2-OT-4111034No protein-
 
lncRNA
--
ENST00000725601.1SOX2-OT-3651031No protein-
 
lncRNA
--
ENST00000736124.1SOX2-OT-4081015No protein-
 
lncRNA
--
ENST00000630150.3SOX2-OT-2541009No protein-
 
lncRNA
-TSL:5
ENST00000725586.1SOX2-OT-3501006No protein-
 
lncRNA
--
ENST00000736086.1SOX2-OT-370998No protein-
 
lncRNA
--
ENST00000646712.2SOX2-OT-283994No protein-
 
lncRNA
--
ENST00000736085.1SOX2-OT-369988No protein-
 
lncRNA
--
ENST00000736101.1SOX2-OT-385987No protein-
 
lncRNA
--
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
-TSL:3
ENST00000725568.1SOX2-OT-332975No protein-
 
lncRNA
-GENCODE Basic
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
-TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
-TSL:2
ENST00000725592.1SOX2-OT-356876No protein-
 
lncRNA
--
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
-TSL:5
ENST00000736084.1SOX2-OT-368871No protein-
 
lncRNA
--
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
-TSL:5
ENST00000725566.1SOX2-OT-330864No protein-
 
lncRNA
--
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
--
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
-TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
-TSL:5
ENST00000736102.1SOX2-OT-386840No protein-
 
lncRNA
--
ENST00000600778.4SOX2-OT-233837No protein-
 
lncRNA
-TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
-TSL:5
ENST00000685509.2SOX2-OT-305835No protein-
 
lncRNA
--
ENST00000629112.5SOX2-OT-249830No protein-
 
lncRNA
-TSL:5
ENST00000689942.2SOX2-OT-312822No protein-
 
lncRNA
--
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
-TSL:5
ENST00000725558.1SOX2-OT-322815No protein-
 
lncRNA
--
ENST00000725600.1SOX2-OT-364806No protein-
 
lncRNA
--
ENST00000630887.5SOX2-OT-257800No protein-
 
lncRNA
-TSL:5
ENST00000686782.2SOX2-OT-308799No protein-
 
lncRNA
--
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
-TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
--
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
--
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
-TSL:5
ENST00000725565.1SOX2-OT-329786No protein-
 
lncRNA
--
ENST00000628343.4SOX2-OT-245784No protein-
 
lncRNA
-TSL:5
ENST00000725560.1SOX2-OT-324783No protein-
 
lncRNA
--
ENST00000593330.2SOX2-OT-219779No protein-
 
lncRNA
-TSL:3
ENST00000725595.1SOX2-OT-359776No protein-
 
lncRNA
-GENCODE Basic
ENST00000725588.1SOX2-OT-352772No protein-
 
lncRNA
--
ENST00000702256.1SOX2-OT-318760No protein-
 
lncRNA
--
ENST00000725582.1SOX2-OT-346756No protein-
 
lncRNA
--
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
-TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
-TSL:5
ENST00000736106.1SOX2-OT-390751No protein-
 
lncRNA
--
ENST00000725583.1SOX2-OT-347750No protein-
 
lncRNA
--
ENST00000736105.1SOX2-OT-389748No protein-
 
lncRNA
--
ENST00000702337.2SOX2-OT-319747No protein-
 
lncRNA
--
ENST00000736103.1SOX2-OT-387746No protein-
 
lncRNA
--
ENST00000725594.1SOX2-OT-358744No protein-
 
lncRNA
-GENCODE Basic
ENST00000736128.1SOX2-OT-412738No protein-
 
lncRNA
--
ENST00000736113.1SOX2-OT-397734No protein-
 
lncRNA
--
ENST00000736121.1SOX2-OT-405731No protein-
 
lncRNA
--
ENST00000725563.1SOX2-OT-327722No protein-
 
lncRNA
--
ENST00000725570.1SOX2-OT-334721No protein-
 
lncRNA
--
ENST00000689495.2SOX2-OT-311718No protein-
 
lncRNA
--
ENST00000685088.2SOX2-OT-304717No protein-
 
lncRNA
--
ENST00000725569.1SOX2-OT-333717No protein-
 
lncRNA
--
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
-TSL:5
ENST00000736116.1SOX2-OT-400708No protein-
 
lncRNA
--
ENST00000693697.2SOX2-OT-316706No protein-
 
lncRNA
--
ENST00000629830.4SOX2-OT-253700No protein-
 
lncRNA
-TSL:5
ENST00000736110.1SOX2-OT-394699No protein-
 
lncRNA
-GENCODE Basic
ENST00000736107.1SOX2-OT-391693No protein-
 
lncRNA
--
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
-TSL:5
ENST00000702225.2SOX2-OT-317689No protein-
 
lncRNA
--
ENST00000686214.2SOX2-OT-307687No protein-
 
lncRNA
--
ENST00000687464.3SOX2-OT-309686No protein-
 
lncRNA
--
ENST00000725577.1SOX2-OT-341679No protein-
 
lncRNA
--
ENST00000736114.1SOX2-OT-398678No protein-
 
lncRNA
--
ENST00000725598.1SOX2-OT-362677No protein-
 
lncRNA
--
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
-TSL:5
ENST00000736115.1SOX2-OT-399674No protein-
 
lncRNA
--
ENST00000736109.1SOX2-OT-393672No protein-
 
lncRNA
--
ENST00000736119.1SOX2-OT-403672No protein-
 
lncRNA
--
ENST00000490005.3SOX2-OT-211669No protein-
 
lncRNA
-TSL:2
ENST00000736130.1SOX2-OT-414662No protein-
 
lncRNA
--
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000725585.1SOX2-OT-349653No protein-
 
lncRNA
--
ENST00000736111.1SOX2-OT-395653No protein-
 
lncRNA
--
ENST00000498226.6SOX2-OT-217651No protein-
 
lncRNA
-TSL:4
ENST00000725593.1SOX2-OT-357645No protein-
 
lncRNA
--
ENST00000725580.1SOX2-OT-344644No protein-
 
lncRNA
--
ENST00000725559.1SOX2-OT-323640No protein-
 
lncRNA
--
ENST00000725591.1SOX2-OT-355635No protein-
 
lncRNA
--
ENST00000736123.1SOX2-OT-407630No protein-
 
lncRNA
--
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
-TSL:5
ENST00000736120.1SOX2-OT-404623No protein-
 
lncRNA
--
ENST00000629273.3SOX2-OT-250620No protein-
 
lncRNA
-GENCODE BasicTSL:5
ENST00000725575.1SOX2-OT-339608No protein-
 
lncRNA
--
ENST00000736122.1SOX2-OT-406606No protein-
 
lncRNA
--
ENST00000725578.1SOX2-OT-342594No protein-
 
lncRNA
--
ENST00000725602.1SOX2-OT-366584No protein-
 
lncRNA
--
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
-TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
-TSL:4
ENST00000736104.1SOX2-OT-388578No protein-
 
lncRNA
--
ENST00000736108.1SOX2-OT-392578No protein-
 
lncRNA
--
ENST00000736087.1SOX2-OT-371577No protein-
 
lncRNA
--
ENST00000725584.1SOX2-OT-348573No protein-
 
lncRNA
--
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
-TSL:5
ENST00000725579.1SOX2-OT-343570No protein-
 
lncRNA
--
ENST00000725571.1SOX2-OT-335567No protein-
 
lncRNA
--
ENST00000736112.1SOX2-OT-396563No protein-
 
lncRNA
--
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
-TSL:4
ENST00000725603.1SOX2-OT-367535No protein-
 
lncRNA
--
ENST00000736118.1SOX2-OT-402514No protein-
 
lncRNA
--
ENST00000725596.1SOX2-OT-360513No protein-
 
lncRNA
--
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
-TSL:5
ENST00000736117.1SOX2-OT-401503No protein-
 
lncRNA
--
ENST00000736088.1SOX2-OT-372498No protein-
 
lncRNA
--
ENST00000725581.1SOX2-OT-345496No protein-
 
lncRNA
--
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
-TSL:5
ENST00000725587.1SOX2-OT-351480No protein-
 
lncRNA
--
ENST00000736098.1SOX2-OT-382474No protein-
 
lncRNA
--
ENST00000725597.1SOX2-OT-361472No protein-
 
lncRNA
--
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
-TSL:5
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
-TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
-TSL:5
ENST00000736099.1SOX2-OT-383443No protein-
 
lncRNA
--
ENST00000736129.1SOX2-OT-413411No protein-
 
lncRNA
--
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
--
ENST00000736097.1SOX2-OT-381388No protein-
 
lncRNA
--
ENST00000736100.1SOX2-OT-384364No protein-
 
lncRNA
--
ENST00000725599.1SOX2-OT-363354No protein-
 
lncRNA
--
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
-TSL:5
ENST00000736089.1SOX2-OT-373319No protein-
 
lncRNA
--