Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC01186 ENSG00000236751

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Description

long intergenic non-protein coding RNA 1186 [Source:HGNC Symbol;Acc:HGNC:49573]

Gene Synonyms

ZNF674-1

Location

Chromosome X: 46,256,759-46,327,716 reverse strand.

GRCh38:CM000685.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000668280.1	LINC01186-204	917	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000816079.1	LINC01186-212	1947	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670979.2	LINC01186-205	1001	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446884.2	LINC01186-201	997	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000816082.1	LINC01186-215	691	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000816075.1	LINC01186-208	652	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000816077.1	LINC01186-210	593	No protein	-	lncRNA		-	-
ENST00000658351.1	LINC01186-202	580	No protein	-	lncRNA		-	-
ENST00000816076.1	LINC01186-209	496	No protein	-	lncRNA		-	-
ENST00000816080.1	LINC01186-213	469	No protein	-	lncRNA		-	-
ENST00000816081.1	LINC01186-214	462	No protein	-	lncRNA		-	-
ENST00000660228.2	LINC01186-203	426	No protein	-	lncRNA		-	-
ENST00000686272.2	LINC01186-206	401	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000816078.1	LINC01186-211	340	No protein	-	lncRNA		-	-
ENST00000702012.1	LINC01186-207	334	No protein	-	lncRNA		-	-

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Summary

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