Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC00437 ENSG00000236354

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Description

long intergenic non-protein coding RNA 437 [Source:HGNC Symbol;Acc:HGNC:42772]

Gene Synonyms

TCONS_00021639

Location

Chromosome 13: 38,533,343-38,686,924 reverse strand.

GRCh38:CM000675.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000756067.1	LINC00437-202	961	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000756069.1	LINC00437-204	1053	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756073.1	LINC00437-208	1047	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756070.1	LINC00437-205	1025	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756077.1	LINC00437-212	1011	No protein	-	lncRNA		-	-
ENST00000756068.1	LINC00437-203	857	No protein	-	lncRNA		-	-
ENST00000414161.1	LINC00437-201	791	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000756071.1	LINC00437-206	670	No protein	-	lncRNA		-	-
ENST00000756079.1	LINC00437-214	646	No protein	-	lncRNA		-	-
ENST00000756075.1	LINC00437-210	612	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756072.1	LINC00437-207	583	No protein	-	lncRNA		-	-
ENST00000756074.1	LINC00437-209	537	No protein	-	lncRNA		-	-
ENST00000756078.1	LINC00437-213	495	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756076.1	LINC00437-211	438	No protein	-	lncRNA		-	-
ENST00000756080.1	LINC00437-215	199	No protein	-	lncRNA		-	-

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Summary

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