Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCSC2 ENSG00000236130

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Description

papillary thyroid carcinoma susceptibility candidate 2 [Source:HGNC Symbol;Acc:HGNC:44086]

Location

Chromosome 9: 97,699,625-97,853,116 reverse strand.

GRCh38:CM000671.2

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000824737.1	PTCSC2-209	1250	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649461.1	PTCSC2-206	1947	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824738.1	PTCSC2-210	1538	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000649253.2	PTCSC2-205	1366	No protein	-	lncRNA		-	-
ENST00000824746.1	PTCSC2-218	1234	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824745.1	PTCSC2-217	1205	No protein	-	lncRNA		-	-
ENST00000648625.1	PTCSC2-204	991	No protein	-	lncRNA		-	-
ENST00000824740.1	PTCSC2-212	786	No protein	-	lncRNA		-	-
ENST00000648027.1	PTCSC2-202	723	No protein	-	lncRNA		-	-
ENST00000824742.1	PTCSC2-214	705	No protein	-	lncRNA		-	-
ENST00000824741.1	PTCSC2-213	657	No protein	-	lncRNA		-	-
ENST00000824743.1	PTCSC2-215	609	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824739.1	PTCSC2-211	586	No protein	-	lncRNA		-	-
ENST00000648505.1	PTCSC2-203	583	No protein	-	lncRNA		-	-
ENST00000430058.2	PTCSC2-201	465	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000649526.1	PTCSC2-207	445	No protein	-	lncRNA		-	-
ENST00000650104.1	PTCSC2-208	418	No protein	-	lncRNA		-	-
ENST00000824744.1	PTCSC2-216	272	No protein	-	lncRNA		-	-

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Summary

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