Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC01564 ENSG00000235899

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Description

long intergenic non-protein coding RNA 1564 [Source:HGNC Symbol;Acc:HGNC:51361]

Gene Synonyms

RAMS11, TCONS_00011314

Location

Chromosome 6: 53,616,471-53,707,024 forward strand.

GRCh38:CM000668.2

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000701539.1	LINC01564-209	761	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668029.1	LINC01564-203	1229	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000697617.1	LINC01564-206	1153	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000702108.1	LINC01564-210	867	No protein	-	lncRNA		-	-
ENST00000701316.1	LINC01564-208	857	No protein	-	lncRNA		-	-
ENST00000692070.1	LINC01564-204	834	No protein	-	lncRNA		-	-
ENST00000448327.3	LINC01564-201	627	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000659393.3	LINC01564-202	607	No protein	-	lncRNA		-	-
ENST00000697616.1	LINC01564-205	594	No protein	-	lncRNA		-	-
ENST00000702141.1	LINC01564-211	553	No protein	-	lncRNA		-	-
ENST00000700824.1	LINC01564-207	492	No protein	-	lncRNA		-	-

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Summary

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