Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
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ID History
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Gene: LINC00700 ENSG00000234962

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Description

long intergenic non-protein coding RNA 700 [Source:HGNC Symbol;Acc:HGNC:27422]

Location

Chromosome 10: 1,989,076-2,015,005 reverse strand.

GRCh38:CM000672.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000671670.2	LINC00700-210	2240	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413603.6	LINC00700-201	2762	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000667563.2	LINC00700-209	990	No protein	-	lncRNA		-	-
ENST00000765887.1	LINC00700-212	924	No protein	-	lncRNA		-	-
ENST00000765886.1	LINC00700-211	894	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664401.2	LINC00700-206	891	No protein	-	lncRNA		-	-
ENST00000664577.1	LINC00700-207	874	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660120.1	LINC00700-205	835	No protein	-	lncRNA		-	-
ENST00000665101.1	LINC00700-208	814	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765890.1	LINC00700-215	812	No protein	-	lncRNA		-	-
ENST00000454424.2	LINC00700-203	803	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000765888.1	LINC00700-213	789	No protein	-	lncRNA		-	-
ENST00000438372.1	LINC00700-202	777	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000765889.1	LINC00700-214	703	No protein	-	lncRNA		-	-
ENST00000654063.1	LINC00700-204	585	No protein	-	lncRNA		-	-

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Summary

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