Gene: LINC01880 ENSG00000232002

Description

long intergenic non-protein coding RNA 1880 [Source:HGNC Symbol;Acc:HGNC:52699]

Location

Chromosome 2: 242,047,695-242,084,748 reverse strand.

GRCh38:CM000664.2

View alleles of this gene on alternative sequences

About this gene

This gene has 10 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000446593.1	LINC01880-201	561	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000824544.1	LINC01880-204	2012	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824545.1	LINC01880-205	1789	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824550.1	LINC01880-210	1530	No protein	-	lncRNA	-	-
ENST00000824546.1	LINC01880-206	1429	No protein	-	lncRNA	-	-
ENST00000824547.1	LINC01880-207	1308	No protein	-	lncRNA	-	-
ENST00000661866.2	LINC01880-202	1272	No protein	-	lncRNA	-	-
ENST00000662783.2	LINC01880-203	1202	No protein	-	lncRNA	-	-
ENST00000824548.1	LINC01880-208	646	No protein	-	lncRNA	-	-
ENST00000824549.1	LINC01880-209	464	No protein	-	lncRNA	-	-

Gene: LINC01880 ENSG00000232002

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Gene: LINC01880 ENSG00000232002

Summary

About Us

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