Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
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ID History
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Gene: FILNC1 ENSG00000231426

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Description

FOXO induced long non-coding RNA 1 [Source:HGNC Symbol;Acc:HGNC:53755]

Location

Chromosome 6: 139,677,639-139,860,476 forward strand.

GRCh38:CM000668.2

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000647189.1	FILNC1-206	1502	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000642381.1	FILNC1-203	1499	No protein	-	lncRNA		-	-
ENST00000647420.1	FILNC1-207	1455	No protein	-	lncRNA		-	-
ENST00000644936.1	FILNC1-204	1450	No protein	-	lncRNA		-	-
ENST00000414038.6	FILNC1-201	1397	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000646293.2	FILNC1-205	1344	No protein	-	lncRNA		-	-
ENST00000668346.1	FILNC1-208	1253	No protein	-	lncRNA		-	-
ENST00000431609.2	FILNC1-202	981	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000801712.1	FILNC1-210	703	No protein	-	lncRNA		-	-
ENST00000824670.1	FILNC1-212	654	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824669.1	FILNC1-211	629	No protein	-	lncRNA		-	-
ENST00000824671.1	FILNC1-213	501	No protein	-	lncRNA		-	-
ENST00000801711.1	FILNC1-209	314	No protein	-	lncRNA		-	-

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Summary

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