Gene: LINC01822 ENSG00000229621

Description

long intergenic non-protein coding RNA 1822 [Source:HGNC Symbol;Acc:HGNC:52627]

Location

Chromosome 2: 21,638,068-21,710,737 reverse strand.

GRCh38:CM000664.2

View alleles of this gene on alternative sequences

About this gene

This gene has 18 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000753595.1	LINC01822-211	857	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000668104.2	LINC01822-209	2330	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435682.2	LINC01822-203	2212	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000663972.1	LINC01822-206	1277	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664721.1	LINC01822-207	1206	No protein	-	lncRNA	-	-
ENST00000667311.1	LINC01822-208	988	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753596.1	LINC01822-212	962	No protein	-	lncRNA	-	-
ENST00000671687.1	LINC01822-210	874	No protein	-	lncRNA	-	-
ENST00000753826.1	LINC01822-213	859	No protein	-	lncRNA	-	-
ENST00000753827.1	LINC01822-214	838	No protein	-	lncRNA	-	-
ENST00000412424.2	LINC01822-201	795	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000653083.2	LINC01822-204	782	No protein	-	lncRNA	-	-
ENST00000416032.8	LINC01822-202	775	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000654277.1	LINC01822-205	772	No protein	-	lncRNA	-	-
ENST00000753830.1	LINC01822-217	703	No protein	-	lncRNA	-	-
ENST00000753829.1	LINC01822-216	663	No protein	-	lncRNA	-	-
ENST00000753831.1	LINC01822-218	595	No protein	-	lncRNA	-	-
ENST00000753828.1	LINC01822-215	578	No protein	-	lncRNA	-	-

Gene: LINC01822 ENSG00000229621

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Gene: LINC01822 ENSG00000229621

Summary

About Us

Get help

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