Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- GO: Anatomical entity
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Gene: FALEC ENSG00000228126

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Description

focally amplified long non-coding RNA in epithelial cancer [Source:HGNC Symbol;Acc:HGNC:43713]

Gene Synonyms

FAL1, LINC00568, NCRNA-A1

Location

Chromosome 1: 150,515,667-150,537,267 forward strand.

GRCh38:CM000663.2

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000416894.2	FALEC-201	2128	No protein	-	lncRNA		NR_186305.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000718312.1	FALEC-204	2271	No protein	-	lncRNA		-	-
ENST00000717990.1	FALEC-202	1800	No protein	-	lncRNA		-	-
ENST00000823966.1	FALEC-209	1450	No protein	-	lncRNA		-	-
ENST00000718313.1	FALEC-205	729	No protein	-	lncRNA		-	-
ENST00000718314.1	FALEC-206	663	No protein	-	lncRNA		-	-
ENST00000823964.1	FALEC-207	602	No protein	-	lncRNA		-	-
ENST00000823965.1	FALEC-208	564	No protein	-	lncRNA		-	-
ENST00000717991.1	FALEC-203	472	No protein	-	lncRNA		-	-

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Summary

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