Gene: LINC00658 ENSG00000226995

Description

long intergenic non-protein coding RNA 658 [Source:HGNC Symbol;Acc:HGNC:44315]

Location

Chromosome 20: 5,426,892-5,471,120 reverse strand.

GRCh38:CM000682.2

About this gene

This gene has 68 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000593667.2	LINC00658-204	1540	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000600157.6	LINC00658-206	1762	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663522.1	LINC00658-231	1725	No protein	-	lncRNA	-	-
ENST00000671629.1	LINC00658-258	1661	No protein	-	lncRNA	-	-
ENST00000665426.1	LINC00658-240	1652	No protein	-	lncRNA	-	-
ENST00000663916.1	LINC00658-233	1624	No protein	-	lncRNA	-	-
ENST00000420529.6	LINC00658-202	1607	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000665811.1	LINC00658-243	1582	No protein	-	lncRNA	-	-
ENST00000665203.1	LINC00658-239	1579	No protein	-	lncRNA	-	-
ENST00000670106.1	LINC00658-256	1543	No protein	-	lncRNA	-	-
ENST00000665611.1	LINC00658-241	1528	No protein	-	lncRNA	-	-
ENST00000668401.1	LINC00658-250	1509	No protein	-	lncRNA	-	-
ENST00000665791.1	LINC00658-242	1505	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658725.1	LINC00658-227	1503	No protein	-	lncRNA	-	-
ENST00000666158.1	LINC00658-244	1503	No protein	-	lncRNA	-	-
ENST00000666637.1	LINC00658-245	1497	No protein	-	lncRNA	-	-
ENST00000664898.2	LINC00658-237	1469	No protein	-	lncRNA	-	-
ENST00000653999.1	LINC00658-212	1468	No protein	-	lncRNA	-	-
ENST00000669038.1	LINC00658-251	1458	No protein	-	lncRNA	-	-
ENST00000656899.1	LINC00658-223	1439	No protein	-	lncRNA	-	-
ENST00000663995.1	LINC00658-234	1438	No protein	-	lncRNA	-	-
ENST00000654287.1	LINC00658-214	1432	No protein	-	lncRNA	-	-
ENST00000666888.1	LINC00658-247	1422	No protein	-	lncRNA	-	-
ENST00000653876.1	LINC00658-211	1418	No protein	-	lncRNA	-	-
ENST00000653249.1	LINC00658-209	1415	No protein	-	lncRNA	-	-
ENST00000668033.1	LINC00658-249	1411	No protein	-	lncRNA	-	-
ENST00000654489.1	LINC00658-216	1404	No protein	-	lncRNA	-	-
ENST00000664467.1	LINC00658-236	1397	No protein	-	lncRNA	-	-
ENST00000659505.1	LINC00658-228	1386	No protein	-	lncRNA	-	-
ENST00000794408.1	LINC00658-260	1383	No protein	-	lncRNA	-	-
ENST00000669585.1	LINC00658-254	1346	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654309.2	LINC00658-215	1335	No protein	-	lncRNA	-	-
ENST00000663728.1	LINC00658-232	1334	No protein	-	lncRNA	-	-
ENST00000664317.1	LINC00658-235	1315	No protein	-	lncRNA	-	-
ENST00000609252.2	LINC00658-207	1315	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000794407.1	LINC00658-259	1311	No protein	-	lncRNA	-	-
ENST00000653836.1	LINC00658-210	1302	No protein	-	lncRNA	-	-
ENST00000422352.6	LINC00658-203	1292	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658058.1	LINC00658-226	1291	No protein	-	lncRNA	-	-
ENST00000794409.1	LINC00658-261	1290	No protein	-	lncRNA	-	-
ENST00000656275.1	LINC00658-219	1284	No protein	-	lncRNA	-	-
ENST00000656534.1	LINC00658-221	1264	No protein	-	lncRNA	-	-
ENST00000656638.1	LINC00658-222	1255	No protein	-	lncRNA	-	-
ENST00000654250.1	LINC00658-213	1239	No protein	-	lncRNA	-	-
ENST00000669847.1	LINC00658-255	1237	No protein	-	lncRNA	-	-
ENST00000669296.1	LINC00658-253	1230	No protein	-	lncRNA	-	-
ENST00000664972.1	LINC00658-238	1218	No protein	-	lncRNA	-	-
ENST00000661909.2	LINC00658-230	1217	No protein	-	lncRNA	-	-
ENST00000654514.1	LINC00658-217	1217	No protein	-	lncRNA	-	-
ENST00000657840.1	LINC00658-225	1206	No protein	-	lncRNA	-	-
ENST00000667166.1	LINC00658-248	1190	No protein	-	lncRNA	-	-
ENST00000656400.1	LINC00658-220	1175	No protein	-	lncRNA	-	-
ENST00000657133.2	LINC00658-224	1127	No protein	-	lncRNA	-	-
ENST00000669067.1	LINC00658-252	1089	No protein	-	lncRNA	-	-
ENST00000794411.1	LINC00658-263	1087	No protein	-	lncRNA	-	-
ENST00000660117.1	LINC00658-229	1080	No protein	-	lncRNA	-	-
ENST00000670531.1	LINC00658-257	1042	No protein	-	lncRNA	-	-
ENST00000794414.1	LINC00658-266	1016	No protein	-	lncRNA	-	-
ENST00000655376.2	LINC00658-218	1008	No protein	-	lncRNA	-	-
ENST00000599273.2	LINC00658-205	959	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000666761.2	LINC00658-246	946	No protein	-	lncRNA	-	-
ENST00000794413.1	LINC00658-265	894	No protein	-	lncRNA	-	-
ENST00000651363.1	LINC00658-208	817	No protein	-	lncRNA	-	-
ENST00000794410.1	LINC00658-262	802	No protein	-	lncRNA	-	-
ENST00000414677.2	LINC00658-201	737	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000794412.1	LINC00658-264	730	No protein	-	lncRNA	-	-
ENST00000794415.1	LINC00658-267	615	No protein	-	lncRNA	-	-
ENST00000794416.1	LINC00658-268	330	No protein	-	lncRNA	-	-

Gene: LINC00658 ENSG00000226995

Summary

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Gene: LINC00658 ENSG00000226995

Summary

About Us

Get help

Our sister sites

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