Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: CFAP95-DT ENSG00000225626

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Description

CFAP95 divergent transcript [Source:HGNC Symbol;Acc:HGNC:48713]

Gene Synonyms

C9ORF135-AS1, C9ORF135-DT

Location

Chromosome 9: 69,817,047-69,820,794 reverse strand.

GRCh38:CM000671.2

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000727167.1	CFAP95-DT-208	652	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000662063.1	CFAP95-DT-207	2002	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655860.1	CFAP95-DT-205	1488	No protein	-	lncRNA		-	-
ENST00000439418.1	CFAP95-DT-201	1375	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660402.2	CFAP95-DT-206	1227	No protein	-	lncRNA		-	-
ENST00000727172.1	CFAP95-DT-213	1003	No protein	-	lncRNA		-	-
ENST00000453410.1	CFAP95-DT-202	975	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000652595.1	CFAP95-DT-204	840	No protein	-	lncRNA		-	-
ENST00000727173.1	CFAP95-DT-214	829	No protein	-	lncRNA		-	-
ENST00000727171.1	CFAP95-DT-212	678	No protein	-	lncRNA		-	-
ENST00000727168.1	CFAP95-DT-209	634	No protein	-	lncRNA		-	-
ENST00000727170.1	CFAP95-DT-211	576	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526458.1	CFAP95-DT-203	568	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000727169.1	CFAP95-DT-210	490	No protein	-	lncRNA		-	-

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Summary

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