Gene: LINC01117 ENSG00000224577

Description

long intergenic non-protein coding RNA 1117 [Source:HGNC Symbol;Acc:HGNC:49260]

Location

Chromosome 2: 176,429,159-176,878,787 forward strand.

GRCh38:CM000664.2

About this gene

This gene has 42 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000814385.1	LINC01117-206	596	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000814394.1	LINC01117-215	2199	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702732.2	LINC01117-205	1905	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814386.1	LINC01117-207	1814	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814389.1	LINC01117-210	1694	No protein	-	lncRNA	-	-
ENST00000702503.1	LINC01117-204	1687	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814393.1	LINC01117-214	1632	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814396.1	LINC01117-217	1505	No protein	-	lncRNA	-	-
ENST00000814395.1	LINC01117-216	1278	No protein	-	lncRNA	-	-
ENST00000814390.1	LINC01117-211	1240	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814403.1	LINC01117-224	1202	No protein	-	lncRNA	-	-
ENST00000814408.1	LINC01117-229	1191	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814416.1	LINC01117-237	1160	No protein	-	lncRNA	-	-
ENST00000652227.1	LINC01117-202	1124	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814388.1	LINC01117-209	1092	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814401.1	LINC01117-222	1091	No protein	-	lncRNA	-	-
ENST00000814399.1	LINC01117-220	1074	No protein	-	lncRNA	-	-
ENST00000814413.1	LINC01117-234	1019	No protein	-	lncRNA	-	-
ENST00000652995.1	LINC01117-203	985	No protein	-	lncRNA	-	-
ENST00000814398.1	LINC01117-219	921	No protein	-	lncRNA	-	-
ENST00000814417.1	LINC01117-238	920	No protein	-	lncRNA	-	-
ENST00000814387.1	LINC01117-208	891	No protein	-	lncRNA	-	-
ENST00000814392.1	LINC01117-213	840	No protein	-	lncRNA	-	-
ENST00000814414.1	LINC01117-235	828	No protein	-	lncRNA	-	-
ENST00000814402.1	LINC01117-223	739	No protein	-	lncRNA	-	-
ENST00000814407.1	LINC01117-228	706	No protein	-	lncRNA	-	-
ENST00000443670.1	LINC01117-201	699	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000814404.1	LINC01117-225	679	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814409.1	LINC01117-230	656	No protein	-	lncRNA	-	-
ENST00000814411.1	LINC01117-232	638	No protein	-	lncRNA	-	-
ENST00000814400.1	LINC01117-221	633	No protein	-	lncRNA	-	-
ENST00000814391.1	LINC01117-212	611	No protein	-	lncRNA	-	-
ENST00000814406.1	LINC01117-227	609	No protein	-	lncRNA	-	-
ENST00000814420.1	LINC01117-241	598	No protein	-	lncRNA	-	-
ENST00000814419.1	LINC01117-240	585	No protein	-	lncRNA	-	-
ENST00000814405.1	LINC01117-226	583	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814397.1	LINC01117-218	565	No protein	-	lncRNA	-	-
ENST00000814421.1	LINC01117-242	487	No protein	-	lncRNA	-	-
ENST00000814415.1	LINC01117-236	457	No protein	-	lncRNA	-	-
ENST00000814418.1	LINC01117-239	401	No protein	-	lncRNA	-	-
ENST00000814410.1	LINC01117-231	375	No protein	-	lncRNA	-	-
ENST00000814412.1	LINC01117-233	325	No protein	-	lncRNA	-	-

Gene: LINC01117 ENSG00000224577

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Gene: LINC01117 ENSG00000224577

Summary

About Us

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