Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC00114 ENSG00000223806

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Description

long intergenic non-protein coding RNA 114 [Source:HGNC Symbol;Acc:HGNC:1265]

Gene Synonyms

C21ORF24, NCRNA00114

Location

Chromosome 21: 38,733,890-38,773,501 reverse strand.

GRCh38:CM000683.2

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000785532.1	LINC00114-205	1009	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000411989.5	LINC00114-201	1790	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000663481.1	LINC00114-204	1516	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785536.1	LINC00114-209	1231	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785542.1	LINC00114-215	1064	No protein	-	lncRNA		-	-
ENST00000785537.1	LINC00114-210	1057	No protein	-	lncRNA		-	-
ENST00000785539.1	LINC00114-212	1006	No protein	-	lncRNA		-	-
ENST00000429621.1	LINC00114-202	827	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000785535.1	LINC00114-208	783	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785541.1	LINC00114-214	778	No protein	-	lncRNA		-	-
ENST00000785534.1	LINC00114-207	774	No protein	-	lncRNA		-	-
ENST00000785533.1	LINC00114-206	688	No protein	-	lncRNA		-	-
ENST00000448579.5	LINC00114-203	681	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000785543.1	LINC00114-216	651	No protein	-	lncRNA		-	-
ENST00000785538.1	LINC00114-211	596	No protein	-	lncRNA		-	-
ENST00000785540.1	LINC00114-213	546	No protein	-	lncRNA		-	-

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Summary

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