Summary
- Splice variants
- Transcript comparison
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Gene: HDAC4-AS1 ENSG00000222020

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Description

HDAC4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:54064]

Location

Chromosome 2: 239,401,132-239,402,657 forward strand.

GRCh38:CM000664.2

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000750736.1	HDAC4-AS1-208	552	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000690671.3	HDAC4-AS1-206	970	No protein	-	lncRNA		-	-
ENST00000409526.2	HDAC4-AS1-201	680	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000413029.3	HDAC4-AS1-202	586	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000691044.3	HDAC4-AS1-207	579	No protein	-	lncRNA		-	-
ENST00000670479.4	HDAC4-AS1-204	511	No protein	-	lncRNA		-	-
ENST00000750738.1	HDAC4-AS1-210	507	No protein	-	lncRNA		-	-
ENST00000428471.4	HDAC4-AS1-203	456	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000688456.2	HDAC4-AS1-205	437	No protein	-	lncRNA		-	-
ENST00000750740.1	HDAC4-AS1-212	431	No protein	-	lncRNA		-	-
ENST00000750737.1	HDAC4-AS1-209	414	No protein	-	lncRNA		-	-
ENST00000750739.1	HDAC4-AS1-211	359	No protein	-	lncRNA		-	-

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Summary

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