Gene: HCP5 ENSG00000206337

Description

HLA complex P5 [Source:HGNC Symbol;Acc:HGNC:21659]

Gene Synonyms

D6S2650E, P5-1

Location

Chromosome 6: 31,463,144-31,494,470 forward strand.

GRCh38:CM000668.2

View alleles of this gene on alternative sequences

About this gene

This gene has 14 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000718214.1	HCP5-213	368	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000414046.3	HCP5-201	9148	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000670109.1	HCP5-206	2591	No protein	-	lncRNA	-	-
ENST00000666495.2	HCP5-205	2005	No protein	-	lncRNA	-	-
ENST00000541196.3	HCP5-204	1689	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000718212.1	HCP5-211	1579	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000674016.2	HCP5-207	1399	No protein	-	lncRNA	-	-
ENST00000718211.1	HCP5-210	1386	No protein	-	lncRNA	-	-
ENST00000718210.1	HCP5-209	1369	No protein	-	lncRNA	-	-
ENST00000467369.2	HCP5-203	1024	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000718215.1	HCP5-214	789	No protein	-	lncRNA	-	-
ENST00000718209.1	HCP5-208	556	No protein	-	lncRNA	-	-
ENST00000460889.5	HCP5-202	465	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000718213.1	HCP5-212	408	No protein	-	lncRNA	-	-

Gene: HCP5 ENSG00000206337

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Gene: HCP5 ENSG00000206337

Summary

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