Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC01547 ENSG00000183250

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Description

long intergenic non-protein coding RNA 1547 [Source:HGNC Symbol;Acc:HGNC:15707]

Gene Synonyms

C21ORF67, C21ORF69

Location

Chromosome 21: 44,932,814-44,939,941 reverse strand.

GRCh38:CM000683.2

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000615847.3	LINC01547-203	3312	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000667826.1	LINC01547-210	4434	No protein	-	lncRNA		-	-
ENST00000663249.1	LINC01547-208	3534	No protein	-	lncRNA		-	-
ENST00000658179.2	LINC01547-206	3202	No protein	-	lncRNA		-	-
ENST00000654166.2	LINC01547-204	2979	No protein	-	lncRNA		-	-
ENST00000657006.1	LINC01547-205	2784	No protein	-	lncRNA		-	-
ENST00000660377.2	LINC01547-207	2403	No protein	-	lncRNA		-	-
ENST00000397841.5	LINC01547-202	2303	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000664358.1	LINC01547-209	1501	No protein	-	lncRNA		-	-
ENST00000690957.1	LINC01547-211	1499	No protein	-	lncRNA		-	-
ENST00000330551.3	LINC01547-201	1033	No protein	-	lncRNA		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Summary

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