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Human (GRCh38.p14)
Description

SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]

Location

Chromosome 3: 18,345,377-18,445,621 reverse strand.

GRCh38:CM000665.2

About this gene

This gene has 36 transcripts (splice variants), 213 orthologues, 1 paralogue and is associated with 4 phenotypes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000338745.11SATB1-2017822763aaENSP00000341024.5
 
Protein coding
CCDS2631Q01826-1 NM_002971.6MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000866369.1SATB1-2285431763aaENSP00000536428.1
 
Protein coding
CCDS2631--GENCODE BasicAPPRIS P3
ENST00000920136.1SATB1-2305037695aaENSP00000590195.1
 
Protein coding
--GENCODE Basic
ENST00000866365.1SATB1-2244975763aaENSP00000536424.1
 
Protein coding
CCDS2631--GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000417717.6SATB1-2044589795aaENSP00000399518.1
 
Protein coding
CCDS56242Q01826-2 -GENCODE BasicTSL:1
ENST00000920137.1SATB1-2314415795aaENSP00000590196.1
 
Protein coding
CCDS56242--GENCODE Basic
ENST00000866366.1SATB1-2254387763aaENSP00000536425.1
 
Protein coding
CCDS2631--GENCODE BasicAPPRIS P3
ENST00000866367.1SATB1-2263916761aaENSP00000536426.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000941468.1SATB1-2333765795aaENSP00000611527.1
 
Protein coding
CCDS56242--GENCODE Basic
ENST00000454909.6SATB1-2093755763aaENSP00000399708.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000920135.1SATB1-2293750763aaENSP00000590194.1
 
Protein coding
CCDS2631--GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000941469.1SATB1-2343697763aaENSP00000611528.1
 
Protein coding
CCDS2631--GENCODE BasicAPPRIS P3
ENST00000866368.1SATB1-2273573763aaENSP00000536427.1
 
Protein coding
CCDS2631--GENCODE BasicAPPRIS P3
ENST00000700177.1SATB1-2193280763aaENSP00000514845.1
 
Protein coding
CCDS2631Q01826-1 -APPRIS P3
ENST00000700179.1SATB1-2213255763aaENSP00000514847.1
 
Protein coding
CCDS2631Q01826-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000700178.1SATB1-2203115763aaENSP00000514846.1
 
Protein coding
CCDS2631Q01826-1 -APPRIS P3
ENST00000941471.1SATB1-2363111793aaENSP00000611530.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000941470.1SATB1-2353103795aaENSP00000611529.1
 
Protein coding
CCDS56242--GENCODE Basic
ENST00000700180.1SATB1-2222973763aaENSP00000514848.1
 
Protein coding
CCDS2631Q01826-1 -GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000415069.6SATB1-2032702763aaENSP00000390529.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE BasicAPPRIS P3TSL:3
ENST00000457005.6SATB1-2102467763aaENSP00000398072.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE BasicAPPRIS P3TSL:4
ENST00000941467.1SATB1-2322315574aaENSP00000611526.1
 
Protein coding
--GENCODE Basic
ENST00000440737.5SATB1-205975224aaENSP00000402982.1
 
Protein coding
C9JP21 -TSL:5CDS 3' incomplete
ENST00000452260.6SATB1-208939172aaENSP00000406727.2
 
Protein coding
C9IZC5 -TSL:4CDS 3' incomplete
ENST00000493952.2SATB1-21762682aaENSP00000453908.1
 
Protein coding
H0YN86 -GENCODE BasicTSL:3
ENST00000414509.5SATB1-202583116aaENSP00000408871.1
 
Protein coding
C9JLL5 -TSL:3CDS 3' incomplete
ENST00000444341.1SATB1-20657970aaENSP00000391344.1
 
Protein coding
C9J3I0 -TSL:4CDS 3' incomplete
ENST00000450898.1SATB1-2074648aaENSP00000394520.1
 
Protein coding
A0A1D5RMP0 -TSL:4CDS 3' incomplete
ENST00000700181.1SATB1-2231739No protein-
 
Protein coding CDS not defined
---
ENST00000475083.5SATB1-212558No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000606296.1SATB1-2184200No protein-
 
Retained intron
--TSL:NA
ENST00000491519.4SATB1-2161000No protein-
 
Retained intron
--TSL:2
ENST00000467628.1SATB1-211551No protein-
 
Retained intron
--TSL:3
ENST00000487699.1SATB1-215477No protein-
 
Retained intron
--TSL:4
ENST00000482788.1SATB1-214406No protein-
 
Retained intron
--TSL:3
ENST00000476178.1SATB1-213361No protein-
 
Retained intron
--TSL:3