Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VSX1 ENSFCAG00000014546

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Description

visual system homeobox 1 [Source:VGNC Symbol;Acc:VGNC:66986]

Location

Chromosome A3: 50,040,858-50,047,665 reverse strand.

Felis_catus_9.0:CM001380.3

About this gene

This gene has 2 transcripts (splice variants) and 174 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSFCAT00000014550.6	VSX1-202	2079	364aa	ENSFCAP00000013494.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M3WKW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSFCAT00000050615.2	VSX1-201	4613	286aa	ENSFCAP00000050064.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A337SQ66	-

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Summary

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