Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSELUG00000005739

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Description

calpain 1 [Ensembl NN prediction with score 99.99%]

Location

Primary_assembly 24: 19,393,771-19,414,002 forward strand.

fEsoLuc1.pri:CM021616.1

About this gene

This gene has 10 transcripts (splice variants), 205 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000061981.2	CAPN1-209	2435	723aa	ENSELUP00000049245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2X7J7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000048089.2	CAPN1-202	3399	704aa	ENSELUP00000049802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2X997	-
ENSELUT00000079006.2	CAPN1-201	3387	700aa	ENSELUP00000078556.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZLC2	-
ENSELUT00000049695.2	CAPN1-206	2411	715aa	ENSELUP00000046313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2WYL2	-
ENSELUT00000065893.2	CAPN1-204	2390	708aa	ENSELUP00000044567.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2WUC9	-
ENSELUT00000076789.2	CAPN1-205	2387	707aa	ENSELUP00000079120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZNS5	-
ENSELUT00000061964.2	CAPN1-210	2309	681aa	ENSELUP00000074794.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Z8R5	-
ENSELUT00000012116.3	CAPN1-207	2300	678aa	ENSELUP00000004575.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8XJ51	-
ENSELUT00000012156.3	CAPN1-208	2225	653aa	ENSELUP00000004556.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8XJ09	-
ENSELUT00000051265.2	CAPN1-203	2204	646aa	ENSELUP00000045105.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2WVD2	-

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Summary

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