Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: col12a1a ENSELUG00000002544

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Description

collagen, type XII, alpha 1a [Ensembl NN prediction with score 73.77%]

Location

Primary_assembly 15: 10,197,134-10,261,580 forward strand.

fEsoLuc1.pri:CM021607.1

About this gene

This gene has 8 transcripts (splice variants), 210 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSELUT00000018146.3	col12a1a-202	10428	3120aa	ENSELUP00000000989.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P8X905	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSELUT00000073429.2	col12a1a-201	10582	3071aa	ENSELUP00000061390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2Y5W3	-
ENSELUT00000067906.2	col12a1a-205	8853	2950aa	ENSELUP00000047833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2X370	-
ENSELUT00000049417.2	col12a1a-208	8832	2943aa	ENSELUP00000063392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YD72	-
ENSELUT00000083339.2	col12a1a-204	8823	2940aa	ENSELUP00000076071.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZEB7	-
ENSELUT00000066822.2	col12a1a-206	8748	2915aa	ENSELUP00000054012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2XLD9	-
ENSELUT00000053305.2	col12a1a-203	8604	2867aa	ENSELUP00000077563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2ZI65	-
ENSELUT00000057062.2	col12a1a-207	8550	2849aa	ENSELUP00000062812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6Q2YBK9	-

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Summary

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