Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LITAF ENSECAG00000017984

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Description

lipopolysaccharide induced TNF factor [Source:VGNC Symbol;Acc:VGNC:19691]

Location

Primary_assembly 13: 34,110,747-34,146,032 forward strand.

EquCab3.0:CM009160.1

About this gene

This gene has 7 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000112885.1	LITAF-202	2279	193aa	ENSECAP00000063127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RMT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000092042.1	LITAF-205	5851	166aa	ENSECAP00000081137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SYN1	-
ENSECAT00000144315.1	LITAF-203	3246	184aa	ENSECAP00000064275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RRA9	-
ENSECAT00000093218.1	LITAF-207	2784	176aa	ENSECAP00000063825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RIR2	-
ENSECAT00000035729.3	LITAF-204	2387	164aa	ENSECAP00000042466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LLF6	-
ENSECAT00000033599.3	LITAF-206	2149	168aa	ENSECAP00000029536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H8I3	-
ENSECAT00000030598.3	LITAF-201	2092	169aa	ENSECAP00000038422.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LDN3	-

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Summary

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