Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RFX1 ENSECAG00000016589

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Description

regulatory factor X1 [Source:VGNC Symbol;Acc:VGNC:22326]

Location

Primary_assembly 7: 46,118,408-46,148,354 forward strand.

EquCab3.0:CM009154.1

About this gene

This gene has 5 transcripts (splice variants), 257 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000069165.2	RFX1-201	4549	1096aa	ENSECAP00000047684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PIJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000064895.3	RFX1-205	6534	1055aa	ENSECAP00000044493.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LQG7	-
ENSECAT00000067507.2	RFX1-203	6361	1000aa	ENSECAP00000048962.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PKY7	-
ENSECAT00000057333.3	RFX1-204	6062	902aa	ENSECAP00000034217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HK05	-
ENSECAT00000062536.2	RFX1-202	3937	892aa	ENSECAP00000028197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2KVE7	-

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Summary

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