Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXC6 ENSECAG00000003682

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Description

homeobox C6 [Source:VGNC Symbol;Acc:VGNC:18850]

Location

Primary_assembly 6: 71,785,332-71,822,454 forward strand.

EquCab3.0:CM009153.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000091631.1	HOXC6-203	1849	312aa	ENSECAP00000083137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T7Q3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000120327.1	HOXC6-204	5320	243aa	ENSECAP00000065480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RS93	-
ENSECAT00000033562.2	HOXC6-207	1963	264aa	ENSECAP00000036318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HZM4	-
ENSECAT00000003767.4	HOXC6-205	1643	235aa	ENSECAP00000002627.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Y566	-
ENSECAT00000112702.1	HOXC6-201	1593	222aa	ENSECAP00000075005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SLY5	-
ENSECAT00000036032.2	HOXC6-206	1467	161aa	ENSECAP00000043212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IBK8	-
ENSECAT00000139394.1	HOXC6-202	1467	221aa	ENSECAP00000055958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0QZN2	-

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Summary

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