Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AFF1 ENSECAG00000003619

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Description

ALF transcription elongation factor 1 [Source:VGNC Symbol;Acc:VGNC:15144]

Location

Primary_assembly 3: 51,942,778-52,114,677 reverse strand.

EquCab3.0:CM009150.1

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000004716.4	AFF1-201	4324	1266aa	ENSECAP00000003273.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QGG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000041317.2	AFF1-203	6342	1122aa	ENSECAP00000045778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IJK3	-
ENSECAT00000083947.1	AFF1-202	6155	1229aa	ENSECAP00000083753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T9J0	-
ENSECAT00000041482.2	AFF1-204	4766	1226aa	ENSECAP00000034726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L7B8	-
ENSECAT00000063696.2	AFF1-205	4567	1212aa	ENSECAP00000041967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I2I8	-
ENSECAT00000056364.3	AFF1-206	4486	1185aa	ENSECAP00000031651.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HC27	-

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Summary

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