Transcript: ENSDART00000193838.1 tpbg1a-202

Description

trophoblast glycoprotein 1a [Source:ZFIN;Acc:ZDB-GENE-120209-2]

Location

About this transcript

This transcript has 2 exons, is annotated with 28 domains and features, is associated with 7 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187084.1	tpbg1a-201	2136	383aa	ENSDARP00000146517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PZ71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000193838.1	tpbg1a-202	2136	382aa	ENSDARP00000157507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,136 bps, Translation length: 382 residues

Version

ENSDART00000193838.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.