Transcript: ENSDART00000193693.1 PER3-204

Description

period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]

Location

Chromosome 11: 39,969,048-40,014,177 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 42 domains and features, is associated with 1538 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010519.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000024304.10	PER3-202	11018	1281aa	ENSDARP00000004561.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000193693.1	PER3-204	3945	1260aa	ENSDARP00000149488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000173401.2	PER3-203	1120	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000173407.2	PER3-201	406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,945 bps, Translation length: 1,260 residues

Version

ENSDART00000193693.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000193693.1 PER3-204

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Transcript: ENSDART00000193693.1 PER3-204

Summary

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