Transcript: ENSDART00000193640.1 gabpa-206

Description

GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]

Gene Synonyms

e4tf, wu:fc12d11

Location

Chromosome 9: 35,017,702-35,026,608 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 27 domains and features, is associated with 282 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069289.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100701.5	gabpa-202	1931	455aa	ENSDARP00000091474.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9E8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193640.1	gabpa-206	2879	455aa	ENSDARP00000154460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9E8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100700.6	gabpa-201	1914	455aa	ENSDARP00000091473.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9E8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182404.1	gabpa-205	1644	455aa	ENSDARP00000150776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9E8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140110.2	gabpa-204	1007	92aa	ENSDARP00000118644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132631.2	gabpa-203	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,879 bps, Translation length: 455 residues

Version

ENSDART00000193640.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000193640.1 gabpa-206

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Transcript: ENSDART00000193640.1 gabpa-206

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