Transcript: ENSDART00000193597.1 si:dkey-238d18.5-204

Description

si:dkey-238d18.5 [Source:ZFIN;Acc:ZDB-GENE-131121-374]

Location

Chromosome 15: 37,891,045-37,921,998 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 32 domains and features, is associated with 620 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000091712.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153491.3	si:dkey-238d18.5-201	2429	601aa	ENSDARP00000129615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000193597.1	si:dkey-238d18.5-204	5493	498aa	ENSDARP00000153090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000181443.1	si:dkey-238d18.5-203	1437	266aa	ENSDARP00000150014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000168790.2	si:dkey-238d18.5-202	1250	262aa	ENSDARP00000132571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 5,493 bps, Translation length: 498 residues

Version

ENSDART00000193597.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000193597.1 si:dkey-238d18.5-204

Summary

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Transcript: ENSDART00000193597.1 si:dkey-238d18.5-204

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