Transcript: ENSDART00000192780.1 crtac1b-204

Description

cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]

Gene Synonyms

si:dkey-51p7.1

Location

Chromosome 13: 40,094,279-40,141,630 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 20 domains and features, is associated with 16 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102517.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000192780.1	crtac1b-204	1887	628aa	ENSDARP00000147630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000157852.2	crtac1b-201	2058	437aa	ENSDARP00000133002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000181618.1	crtac1b-203	1875	624aa	ENSDARP00000144973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000171583.2	crtac1b-202	1869	622aa	ENSDARP00000132839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,887 bps, Translation length: 628 residues

Version

ENSDART00000192780.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000192780.1 crtac1b-204

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Transcript: ENSDART00000192780.1 crtac1b-204

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