Transcript: ENSDART00000191862.1 ripor1-204

Description

RHO family interacting cell polarization regulator 1 [Source:ZFIN;Acc:ZDB-GENE-050420-32]

Gene Synonyms

fam65a, si:dkey-45h7.2

Location

Chromosome 18: 22,220,656-22,282,675 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 28 domains and features, is associated with 1198 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062178.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089549.7	ripor1-201	4140	1082aa	ENSDARP00000083982.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000183961.1	ripor1-203	3732	1082aa	ENSDARP00000155771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXK2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000165464.2	ripor1-202	3723	1097aa	ENSDARP00000136653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000191862.1	ripor1-204	3345	1114aa	ENSDARP00000156445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,345 bps, Translation length: 1,114 residues

Version

ENSDART00000191862.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000191862.1 ripor1-204

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Transcript: ENSDART00000191862.1 ripor1-204

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