Transcript: ENSDART00000190955.1 odc1-205

Description

ornithine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-010816-1]

Gene Synonyms

CHUNP6922, fc54f04, fi06d08, odc, ornithine decarboxylase, wu:fc54f04, wu:fi06d08

Location

Chromosome 17: 51,744,450-51,760,243 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 24 domains and features, is associated with 432 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007377.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149039.3	odc1-202	2140	461aa	ENSDARP00000124918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190955.1	odc1-205	4967	461aa	ENSDARP00000150138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184230.1	odc1-204	1434	461aa	ENSDARP00000154168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149807.2	odc1-203	734	116aa	ENSDARP00000123821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148869.2	odc1-201	545	31aa	ENSDARP00000124766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 4,967 bps, Translation length: 461 residues

Version

ENSDART00000190955.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000190955.1 odc1-205

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Transcript: ENSDART00000190955.1 odc1-205

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