Transcript: ENSDART00000190601.1 hmgcl-203

Description

3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]

Gene Synonyms

zgc:56248

Location

Chromosome 17: 24,855,384-24,866,964 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 541 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021220.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000027957.8	hmgcl-201	2008	340aa	ENSDARP00000026028.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192547.1	hmgcl-204	2539	340aa	ENSDARP00000151601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190601.1	hmgcl-203	2067	340aa	ENSDARP00000145263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136034.2	hmgcl-202	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,067 bps, Translation length: 340 residues

Version

ENSDART00000190601.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000190601.1 hmgcl-203

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Transcript: ENSDART00000190601.1 hmgcl-203

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