Transcript: ENSDART00000190125.1 si:dkey-61f9.2-203

Description

si:dkey-61f9.2 [Source:ZFIN;Acc:ZDB-GENE-041210-12]

Location

Chromosome 4: 3,792,950-3,805,992 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 29 domains and features, is associated with 108 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000112842.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000187709.1	si:dkey-61f9.2-202	1783	427aa	ENSDARP00000153754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000190125.1	si:dkey-61f9.2-203	1940	401aa	ENSDARP00000154009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000132292.2	si:dkey-61f9.2-201	1777	401aa	ENSDARP00000117783.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,940 bps, Translation length: 401 residues

Version

ENSDART00000190125.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000190125.1 si:dkey-61f9.2-203

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Transcript: ENSDART00000190125.1 si:dkey-61f9.2-203

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