Transcript: ENSDART00000190014.1 UNC5C-203

Description

unc-5 netrin receptor Ca [Source:ZFIN;Acc:ZDB-GENE-100921-23]

Location

Chromosome 5: 7,279,104-7,477,362 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 39 domains and features, is associated with 4030 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099133.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000190014.1	UNC5C-203	2442	813aa	ENSDARP00000147126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000164238.2	UNC5C-202	1859	620aa	ENSDARP00000132521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000164862.2	UNC5C-201	951	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,442 bps, Translation length: 813 residues

Version

ENSDART00000190014.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000190014.1 UNC5C-203

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Transcript: ENSDART00000190014.1 UNC5C-203

Summary

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