Transcript: ENSDART00000189879.1 trhra-204

Description

thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]

Gene Synonyms

si:ch73-275n5.1

Location

Chromosome 16: 38,820,660-38,826,777 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 57 domains and features, is associated with 222 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076546.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181721.1	trhra-202	1194	397aa	ENSDARP00000147392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131866.3	trhra-201	1411	393aa	ENSDARP00000116935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAS4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000189879.1	trhra-204	1164	387aa	ENSDARP00000146275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000182538.1	trhra-203	1146	381aa	ENSDARP00000157037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,164 bps, Translation length: 387 residues

Version

ENSDART00000189879.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000189879.1 trhra-204

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Transcript: ENSDART00000189879.1 trhra-204

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