Transcript: ENSDART00000189861.1 ccdc171-203

Description

coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]

Location

Chromosome 23: 45,167,061-45,319,592 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 222 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027381.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000148726.3	ccdc171-201	3563	1077aa	ENSDARP00000123818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000189861.1	ccdc171-203	1957	374aa	ENSDARP00000145976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000166883.2	ccdc171-202	1494	497aa	ENSDARP00000130037.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,957 bps, Translation length: 374 residues

Version

ENSDART00000189861.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000189861.1 ccdc171-203

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Transcript: ENSDART00000189861.1 ccdc171-203

Summary

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