Transcript: ENSDART00000189814.1 TONSL-203

Description

tonsoku-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-041111-230]

Gene Synonyms

im:7145273, nfkbil2, zgc:171416

Location

Chromosome 17: 8,799,451-8,855,305 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 63 domains and features, is associated with 1641 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000071294.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000105326.5	TONSL-202	4822	1427aa	ENSDARP00000096098.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189814.1	TONSL-203	6363	1451aa	ENSDARP00000155125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000191577.1	TONSL-204	6195	1395aa	ENSDARP00000149186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000135466.2	TONSL-201	833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 6,363 bps, Translation length: 1,451 residues

Version

ENSDART00000189814.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000189814.1 TONSL-203

Summary

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Transcript: ENSDART00000189814.1 TONSL-203

Summary

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