Transcript: ENSDART00000188173.1 IQSEC2-203

Description

IQ motif and Sec7 domain ArfGEF 2b [Source:ZFIN;Acc:ZDB-GENE-081105-73]

Location

Chromosome 8: 36,942,262-36,978,659 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 59 domains and features, is associated with 1184 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077709.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111680.4	IQSEC2-202	7955	1520aa	ENSDARP00000100804.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000188173.1	IQSEC2-203	8267	1374aa	ENSDARP00000150625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140410.2	IQSEC2-201	4120	1373aa	ENSDARP00000119031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 8,267 bps, Translation length: 1,374 residues

Version

ENSDART00000188173.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000188173.1 IQSEC2-203

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Transcript: ENSDART00000188173.1 IQSEC2-203

Summary

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