Transcript: ENSDART00000187787.1 agbl1-203

Description

AGBL carboxypeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110207-1]

Location

Chromosome 25: 11,389,220-11,706,389 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 17 domains and features, is associated with 309 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104384.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171408.2	agbl1-202	6383	1028aa	ENSDARP00000135812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000187787.1	agbl1-203	6462	924aa	ENSDARP00000154982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163746.2	agbl1-201	1457	486aa	ENSDARP00000140776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 6,462 bps, Translation length: 924 residues

Version

ENSDART00000187787.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000187787.1 agbl1-203

Summary

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Transcript: ENSDART00000187787.1 agbl1-203

Summary

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